Buckley, D. H . V. Huangyutitham , S-F. Hsu, T. A. Nelson (in Press) 15 N-Stable isotope probing of DNA as a tool for characterizing the functional significance of free-living diazotrophs in soil . Soil Biology and Biochemistry.
Buckley D. H. , L. K. Baumgartner, and P. T. Visscher (2008) Vertical distribution of methane metabolism in microbial mats of the Great Sippewissett Salt Marsh. Environmental Microbiology. 10:967-977.
Buckley, D. H., V. Huangyutitham, S-F. Hsu, and T. A. Nelson. (2007). Stable isotope probing with 15N achieved by disentangling the effects of genome G + C content and isotope enrichment on DNA density. Applied and Environmental Microbiology . 73:3189-3195
Buckley, D. H., V. Huangyutitham, S-F. Hsu, and T. A. Nelson. (2007). Stable isotope probing with 15N2 reveals novel non-cultivated diazotrophs in soil . Applied and Environmental Microbiology . 73:3196-3204
Buckley, D. H. , V. Huangyutitham, T. A. Nelson, A. Rumberger, and J. E. Thies (2006) Diversity of Planctomycetes in soil in relation to soil history and environmental heterogeneity. Applied and Environmental Microbiology . 72:4522-4531.
Baumgartner, L. K., R. P. Reid, C. Dupraz, A. W. Decho, D. H. Buckley, J. R. Spear, K. M. Przekop, P. T. Visscher (2006) Sulfate reducing bacteria in microbial mats: changing paradigms, new discoveries. Sedimentary Geology . 185:131-145.
Buckley, D. H. and T. M. Schmidt (2003) The structure of microbial communities in soil: patterns of microbial distribution their dynamic nature and the lasting impact of cultivation. Environmental Microbiology . 5:441-452.
Visscher, P. T., L. K. Baumgartner, D. H. Buckley , D. R. Rogers, B. M. Bebout, M. Hogan, C. Raleigh, K. Turk and D. J. Des Marais (2003) Dimethyl sulfide and methanethiol as biogenic signatures in laminated microbial ecosystems. Environmental Microbiology. 5:296-308.
Buckley, D. H. and T. M. Schmidt (2001) Environmental factors influencing the distribution of Verrucomicrobia in soil. FEMS Microbial Ecology . 35:105-112.
Buckley, D. H. and T. M. Schmidt (2001) The structure of microbial communities in soil and the lasting impact of cultivation. Microbial Ecology . 42:11-21.
Buckley, D. H., J. R. Graber, T. M. Schmidt (1998) Phylogenetic analysis of nonthermophilic members of the Kingdom Crenarchaeot a and their diversity and abundance in soils. Applied and Environmental Microbiology . 64 :4333-4339.
Yanni, Y. G., R. Y. Rizk, V. Corich, A. Squartini, K. Ninke, S. Philip-Hollingsworth, G. Orgambide, F. DeBruijn, J. Stoltzfus, D. Buckley , T. Schmidt, P. F. Mateos, J. K. Ladha, and F. B. Dazzo (1997) Natural endophytic association between Rhizobium leguminosarum bv. trifolii and rice roots and assesment of its potential to promote rice growth. Plant & Soil . 194 :99-114.
Hogan, D. A., D. H. Buckley , C. Nakatsu, T. M. Schmidt and R. P. Hausinger (1997) Distribution of tfd A in soil isolates that do not degrade 2,4-dichlorophenoxyacetic acid. Microbial Ecology . 34 :90-96.
Belli, W. A., D. H. Buckley and R. E. Marquis (1995) Weak acid effects and fluoride inhibition of glycolysis by Streptococcus mutans GS-5. Canadian Journal of Microbiology . 41 :785-791.
Curran, T. M., D. H. Buckley and R. E. Marquis (1994) Quasi-irreversible inhibition of enolase of Streptococcus mutans by fluoride. FEMS Microbiology Letters . 119 :283-288.
Book Chapters
Buckley, D. H. ( In Press ) Assessing the Diversity of the Unseen Majority. In Sigurdur Greipsson (ed.). Restoration Ecology . Jones and Bartlett Publishers, Inc., Boston .
Buckley, D. H. and T. M. Schmidt ( 2007 ) Measurement of ribosomal RNA abundance by hybridization with oligonucleotide probes. In Methods for General and Molecular Microbiology. Reddy, C. A., T. J. Beveridge, J. A. Breznak, G. A. Marzluf and T. M. Schmidt (eds.). American Society for Microbiology, Washington , D.C.
Buckley, D. H. and T. M. Schmidt (2001) Exploring the diversity of soil – a microbial rainforest. In J. T. Staley and A. L. Reysenbach (eds.). Biodiversity of Microbial Life: Foundation of Earth's Biosphere. Wiley-Liss , New York , pp. 183-208.
Bruns, M. A. and D. H. Buckley ( 2001 ) Isolation and purification of microbial community nucleic acids from environmental samples. In C. J. Hurst, R. L. Crawford, G. R. Knudsen, M. McInerney and L. Stetzenbach (eds.). Manual of Environmental Microbiology, 2nd Edition . American Society for Microbiology, Washington , D.C, pp. 564-572.
Published Abstracts
Buckley, D. H . , S. Hsu, V. Haungyutitham, T. Nelson (2007) “ Analysis of 16S rRNA and nifH genes through 15N2 stable isotope probing reveal that novel Actinobacteria mediate nitrogen fixation in soil ” Presented at the 107 th General Meeting of the American Society of Microbiology.
S. Hsu, T. A. Nelson, D. H. Buckley (2007) “Linking the diversity and activity of diazotrophs across a gradient of agricultural disturbance ” Presented at the 107 th General Meeting of the American Society of Microbiology.
Buckley, D. H . , S. Hsu, V. Haungyutitham, T. Nelson (2006) “ Discovery of nitrogen fixation within novel microbial groups achieved by 15 N 2 stable isotope probing of soil” Presented at the Soil Science Society of America Annual Meeting, Indianapolis, IN.
Buckley, D. H . , S. Hsu, V. Haungyutitham, T. Nelson (July, 2006) “Stable isotope probing with 15 N 2 as a tool to uncover the functional significance of non-cultivated diazotrophs in soil” Presented at the World Congress of Soil Science, Philadelphia , PA.
Buckley, D.H., S-F HSU and T. Nelson (2005) 15 N 2 stable isotope probing of environmental genomes from non-cultivated diazotrophs in soil, Presented at the 105 th General Meeting of the American Society of Microbiology.
Buckley, D. H., S-F HSU and T. Nelson (2005) Targeted environmental genomics: linking genomes to their ecological function”, Presented at the First International Conference of Biotechnology and Modern Agriculture.
Baumgartner, L. K., P. T. Visscher, C. Dupraz, D. H. Buckley , K. M. Przekop, J. R. Spear and N. R. Pace (2005) Microbial communities in lithifying and non-lithifying microbial mats, Eleuthera, Bahamas. Presented at the General Meeting of the NASA Astrobiology Institute.
Buckley, D. H., S-F HSU and T. Nelson ( 2004 ) Targeted Environmental Genomics: Linking Genomes to Their Ecological Function. Presented at the 3rd Annual Microbial Observatories PI Meeting.
Baumgartner, L. K., D. H. Buckley , R. P. Reid and P. T. Visscher (2003) The effects of community structure on biogeochemical processes within stromatolites. Presented at the General Meeting of the American Society of Limnology and Oceanography.
Sytsma, R. E., D. H. Buckley , D. J. Des Marais and P. T. Visscher (2003) Production and consumption of reduced C 1 -gases in microbial mats. Presented at the General Meeting of the NASA Astrobiology Institute.
Buckley, D. H. and T. M Schmidt (2000) Microbial community structure in soil and the effects of agricultural disturbance. Presented at the General Meeting of the American Society for Microbiology.
Buckley, D. H. and T.M Schmidt (1999) The impact of historical land management on microbial community structure in soil. Presented at the General Meeting of the American Society for Microbiology.
Do, Y.S., D. H. Buckley , T. M. Schmidt and A. A. Dispirito (1999) Isolation and characterizations of a new species of Rhodobacter, Rhodobacter PS9, and their role in odor remediation in anaerobic swine waste lagoons. Presented at the General Meeting of the American Society for Microbiology
Buckley, D. H., J. R. Graber and T. M. Schmidt (1998) Phylogenetic analysis of moderate crenarchaeota and their diversity and abundance in soils. Presented at the International Symposium on Microbial Ecology.
Santavy, D. L., D. H. Buckley , A. W. Bruckner and T. M. Schmidt (1998) Cyanobacteria of black-band and red-band diseases affecting western Atlantic corals. Presented at the International Symposium on Microbial Ecology.
Urbance, J. W., D. H. Buckley and T. M. Schmidt (1997) Assessment of microbial diversity in complex communities using high-density oligonucleotide arrays. Presented at the General Meeting of the American Society for Microbiology.
Buckley, D. H. , H. Corlew-Newman, F. Dazzo, F. J. de Bruijn, F. Louws and T. M. Schmidt (1996) Comparison of different methods used in the assessment of bacterial diversity. Presented at the General Meeting of the American Society for Microbiology.
Hogan, D. A., D. H. Buckley and R. Hausinger (1996) Distribution of the tfdA gene in non-2,4-D-degrading microorganisms. Presented at the General Meeting of the American Society for Microbiology.
Santavy, D. L., T. M. Schmidt, S. S. Wilkinson, D. H. Buckley and D. W. Bruckner (1996) The phylogeny and alliance of cyanobacteria affiliated with two band diseases in corals from the western Atlantic. Presented at the General Meeting for the American Society of Microbiology.
Stevenson, B., D. H. Buckley and T. M. Schmidt (1996) Adaptive significance of rRNA operon copy number. Presented at the General Meeting of the American Society for Microbiology.
Buckley, D. H. , W. A. Belli and R. E. Marquis (1994) Inhibition of Streptococcus mutans glycolysis by fluoride and other weak acids. Presented at the General Meeting of the American Society for Microbiology.
Curran, T. M., D. H. Buckley and R. E. Marquis (1994) Irreversible inhibition of enolase of Streptococcus mutans by fluoride. Presented at the General Meeting of the American Society for Microbiology